STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pomkProtein kinase domain-containing protein. (351 aa)    
Predicted Functional Partners:
b3galnt2
Uncharacterized protein.
     
 0.996
LOC103178617
Uncharacterized protein.
     
 0.964
pomgnt2
Fibronectin type-III domain-containing protein.
      
 0.964
dag1
Peptidase S72 domain-containing protein.
     
 0.949
pomt1
Uncharacterized protein.
      
 0.938
rxylt1
Uncharacterized protein.
      
 0.921
pomt2
Uncharacterized protein.
      
 0.911
pomgnt1
ILEI domain-containing protein.
    
 
 0.894
fktn
Uncharacterized protein.
      
 0.845
dpm1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
      
 0.792
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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