Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TectaNIDO domain-containing protein. (291 aa)    
Predicted Functional Partners:
LOC103191247
Uncharacterized protein.
 
   
 0.890
ENSCMIP00000031081
Uncharacterized protein.
 
   
 0.882
ENSCMIP00000034174
Uncharacterized protein.
 
   
 0.864
ENSCMIP00000027912
Uncharacterized protein.
 
   
 0.855
ENSCMIP00000031085
Uncharacterized protein.
 
   
 0.832
LOC103172115
Uncharacterized protein.
 
   
 0.796
fau
Ubiquitin-like domain-containing protein.
   
 0.709
LOC103191204
Uncharacterized protein.
 
   
 0.699
imp3
IMP3, U3 small nucleolar ribonucleoprotein-like protein.
   
  0.552
ENSCMIP00000004712
RanBD1 domain-containing protein.
   
  0.483
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.