fdft1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

fdft1

Uncharacterized protein. (483 aa)

Predicted Functional Partners:

sqle

0.997

LOC103181227

0.984

sc5d

0.980

hsd17b7

0.974

erg28

0.964

pdss1

0.950

pdss2

0.950

ENSCMIP00000034200

0.926

nsdhl

0.912

fnta

0.905

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000034200	fdft1	ENSCMIP00000034200	ENSCMIP00000000066	Gp_dh_N domain-containing protein.	Uncharacterized protein.	0.926
LOC103181227	erg28	ENSCMIP00000044773	ENSCMIP00000028868	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.980
LOC103181227	fdft1	ENSCMIP00000044773	ENSCMIP00000000066	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.984
LOC103181227	hsd17b7	ENSCMIP00000044773	ENSCMIP00000045905	Uncharacterized protein; Belongs to the cytochrome P450 family.	Hydroxysteroid (17-beta) dehydrogenase 7.	0.985
LOC103181227	nsdhl	ENSCMIP00000044773	ENSCMIP00000008739	Uncharacterized protein; Belongs to the cytochrome P450 family.	3Beta_HSD domain-containing protein.	0.966
LOC103181227	sc5d	ENSCMIP00000044773	ENSCMIP00000027110	Uncharacterized protein; Belongs to the cytochrome P450 family.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.956
LOC103181227	sqle	ENSCMIP00000044773	ENSCMIP00000025529	Uncharacterized protein; Belongs to the cytochrome P450 family.	Squalene monooxygenase.	0.984
erg28	LOC103181227	ENSCMIP00000028868	ENSCMIP00000044773	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.980
erg28	fdft1	ENSCMIP00000028868	ENSCMIP00000000066	Uncharacterized protein.	Uncharacterized protein.	0.964
erg28	hsd17b7	ENSCMIP00000028868	ENSCMIP00000045905	Uncharacterized protein.	Hydroxysteroid (17-beta) dehydrogenase 7.	0.973
erg28	nsdhl	ENSCMIP00000028868	ENSCMIP00000008739	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.849
erg28	sc5d	ENSCMIP00000028868	ENSCMIP00000027110	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.973
erg28	sqle	ENSCMIP00000028868	ENSCMIP00000025529	Uncharacterized protein.	Squalene monooxygenase.	0.686
fdft1	ENSCMIP00000034200	ENSCMIP00000000066	ENSCMIP00000034200	Uncharacterized protein.	Gp_dh_N domain-containing protein.	0.926
fdft1	LOC103181227	ENSCMIP00000000066	ENSCMIP00000044773	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.984
fdft1	erg28	ENSCMIP00000000066	ENSCMIP00000028868	Uncharacterized protein.	Uncharacterized protein.	0.964
fdft1	fnta	ENSCMIP00000000066	ENSCMIP00000000047	Uncharacterized protein.	Uncharacterized protein.	0.905
fdft1	hsd17b7	ENSCMIP00000000066	ENSCMIP00000045905	Uncharacterized protein.	Hydroxysteroid (17-beta) dehydrogenase 7.	0.974
fdft1	nsdhl	ENSCMIP00000000066	ENSCMIP00000008739	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.912
fdft1	pdss1	ENSCMIP00000000066	ENSCMIP00000002999	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.950