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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galt6Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
ugcg
Ceramide glucosyltransferase.
     
 0.928
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.908
glb1
Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.
     
 0.907
gba
Glyco_hydro_30C domain-containing protein.
     
 0.904
b3galt4
Hexosyltransferase.
   
 
 0.844
ENSCMIP00000033649
Hexosyltransferase.
   
 
 0.844
St3gal5
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.840
b3gnt5
Hexosyltransferase.
   
 
 0.834
A3galt2
Uncharacterized protein.
     
 0.823
LOC103189521
Glyco_trans_2-like domain-containing protein.
     
 0.805
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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