Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
jam2Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
jam3
Uncharacterized protein.
    
0.999
itga4
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
     
 0.957
tjp1
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.950
LOC103185189
Uncharacterized protein.
    
 0.948
LOC103188814
Integrin beta; Belongs to the integrin beta chain family.
     
 0.925
LOC103177716
Uncharacterized protein.
    
0.914
tjp3
Uncharacterized protein; Belongs to the MAGUK family.
    
 
 0.679
gorasp1
GRASP55_65 domain-containing protein.
    
   0.667
gorasp2
Golgi reassembly-stacking protein 2.
    
   0.667
tjp2
Tight junction protein ZO-2; Belongs to the MAGUK family.
    
 
 0.636
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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