STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirt1Deacetylase sirtuin-type domain-containing protein. (631 aa)    
Predicted Functional Partners:
Foxo3
Fork-head domain-containing protein.
    
 0.991
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
 0.978
LOC103173106
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.971
ep300
Uncharacterized protein.
   
 
 0.971
rps19bp1
Uncharacterized protein.
    
 0.971
arntl
Uncharacterized protein.
    
 0.963
brinp1
MACPF domain-containing protein.
    
 
 0.962
mitf
BHLH domain-containing protein.
     
 0.959
jun
Jun domain-containing protein.
    
 
 0.959
LOC103179768
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
 0.958
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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