STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172355AA_TRNA_LIGASE_II domain-containing protein. (270 aa)    
Predicted Functional Partners:
farsb
B5 domain-containing protein.
  
 0.999
ENSCMIP00000012697
Uncharacterized protein.
 
     0.938
lrrc47
B3_4 domain-containing protein.
  
 0.931
fars2
Phenylalanyl-tRNA synthetase, mitochondrial-like protein.
   
 
0.921
eprs1
Uncharacterized protein.
  
  
 0.877
yars1
Tyrosine--tRNA ligase.
  
  
 0.849
ENSCMIP00000002712
tRNA-synt_1 domain-containing protein.
  
  
 0.664
LOC103189807
Uncharacterized protein; Belongs to the AAA ATPase family.
 
 
  
 0.650
iars1
Isoleucyl-tRNA synthetase, cytoplasmic-like protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.623
kars1
Lysine--tRNA ligase.
  
  
 0.621
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (18%) [HD]