Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001094Endonuclease. (213 aa)    
Predicted Functional Partners:
aifm1
Uncharacterized protein.
    
 
 0.941
ENSCMIP00000042064
Uncharacterized protein.
    
   0.895
ENSCMIP00000003165
Uncharacterized protein.
   
 
 0.783
LOC103173653
Uncharacterized protein.
   
 
 0.783
ptges2
Uncharacterized protein; Belongs to the GST superfamily.
   
   0.778
piwil2
Uncharacterized protein; Belongs to the argonaute family.
      
 0.753
dnajc17
J domain-containing protein.
   
   0.740
LOC103172197
SF4 helicase domain-containing protein.
    
 
 0.737
elac2
Lactamase_B domain-containing protein.
   
 
 0.718
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
      
 0.692
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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