STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pclafPCNA-associated factor-like protein. (123 aa)    
Predicted Functional Partners:
ENSCMIP00000004389
PCNA_N domain-containing protein.
   
  0.970
fancm
Uncharacterized protein.
    
   0.870
ube2c
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.865
kif11
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.843
dlgap5
Uncharacterized protein.
   
  
 0.825
aspm
Uncharacterized protein.
   
  
 0.771
nusap1
Uncharacterized protein.
   
  
 0.759
bub1
Uncharacterized protein.
   
  
 0.756
cdca8
Nbl1_Borealin_N domain-containing protein.
   
  
 0.745
pbk
Lymphokine-activated killer T-cell-originated protein kinase-like protein.
   
  
 0.731
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.