STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103188636Uncharacterized protein. (1077 aa)    
Predicted Functional Partners:
rhof
Rho-related GTP-binding protein RhoF-like protein.
    
  0.516
cdc42
Cell division control protein 42-like protein.
    
 0.512
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.501
arhgap1
Uncharacterized protein.
     
0.498
rpl3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
 0.489
rab7a
Uncharacterized protein.
    
  0.451
ipo5
Importin N-terminal domain-containing protein.
    
 
 0.437
ENSCMIP00000003290
ULP_PROTEASE domain-containing protein.
    
  0.434
ENSCMIP00000012412
ULP_PROTEASE domain-containing protein.
    
  0.434
wdr18
WD_REPEATS_REGION domain-containing protein.
   
 0.423
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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