STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camsap1Uncharacterized protein. (1635 aa)    
Predicted Functional Partners:
ubac1
Uncharacterized protein.
 
    
 0.674
appl1
PID domain-containing protein.
   
 
 0.641
appl2
Uncharacterized protein.
   
 
 0.641
mfhas1
Malignant fibrous histiocytoma-amplified sequence 1-like protein.
    
   0.640
stx18
Syntaxin-18_N domain-containing protein.
      
 0.484
unc119
GMP_PDE_delta domain-containing protein.
      
 0.483
eloc
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
      
 0.471
cul2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
      
 0.471
katnb1
Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
    
 
 0.471
golga2
Uncharacterized protein.
      
 0.470
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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