STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001229Uncharacterized protein. (188 aa)    
Predicted Functional Partners:
rapgef4
Uncharacterized protein.
   
 0.810
rapgefl1
Uncharacterized protein.
    
 0.675
raf1
Uncharacterized protein.
    
 0.672
braf
Uncharacterized protein.
    
 0.672
ccdc24
Uncharacterized protein.
      
 0.662
itsn2
Uncharacterized protein.
    
 0.619
rapgef6
Uncharacterized protein.
    
 0.595
rapgef2
Uncharacterized protein.
    
 0.595
lrrc17
Uncharacterized protein.
    
 0.593
rapgef1
Uncharacterized protein.
    
 0.583
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.