LOC103175060 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

LOC103175060

Uncharacterized protein. (367 aa)

Predicted Functional Partners:

ergic3

0.934

derl2

0.852

trmu

0.695

yars1

0.619

sel1l

0.575

sel1l3

0.571

sel1l2

0.571

eprs1

0.515

ENSCMIP00000000515

0.500

LOC103188158

0.500

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000000515	LOC103175060	ENSCMIP00000000515	ENSCMIP00000001276	Uncharacterized protein.	Uncharacterized protein.	0.500
ENSCMIP00000000515	LOC103188158	ENSCMIP00000000515	ENSCMIP00000024118	Uncharacterized protein.	Uncharacterized protein.	0.713
ENSCMIP00000000515	eprs1	ENSCMIP00000000515	ENSCMIP00000043653	Uncharacterized protein.	Uncharacterized protein.	0.455
ENSCMIP00000000515	ergic3	ENSCMIP00000000515	ENSCMIP00000045028	Uncharacterized protein.	Uncharacterized protein.	0.500
ENSCMIP00000000515	yars1	ENSCMIP00000000515	ENSCMIP00000032726	Uncharacterized protein.	Tyrosine--tRNA ligase.	0.586
LOC103175060	ENSCMIP00000000515	ENSCMIP00000001276	ENSCMIP00000000515	Uncharacterized protein.	Uncharacterized protein.	0.500
LOC103175060	LOC103188158	ENSCMIP00000001276	ENSCMIP00000024118	Uncharacterized protein.	Uncharacterized protein.	0.500
LOC103175060	derl2	ENSCMIP00000001276	ENSCMIP00000027841	Uncharacterized protein.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.852
LOC103175060	eprs1	ENSCMIP00000001276	ENSCMIP00000043653	Uncharacterized protein.	Uncharacterized protein.	0.515
LOC103175060	ergic3	ENSCMIP00000001276	ENSCMIP00000045028	Uncharacterized protein.	Uncharacterized protein.	0.934
LOC103175060	sel1l	ENSCMIP00000001276	ENSCMIP00000033889	Uncharacterized protein.	Fibronectin type-II domain-containing protein.	0.575
LOC103175060	sel1l2	ENSCMIP00000001276	ENSCMIP00000049128	Uncharacterized protein.	Uncharacterized protein.	0.571
LOC103175060	sel1l3	ENSCMIP00000001276	ENSCMIP00000024669	Uncharacterized protein.	Uncharacterized protein.	0.571
LOC103175060	trmu	ENSCMIP00000001276	ENSCMIP00000018276	Uncharacterized protein.	Mitochondrial tRNA-specific 2-thiouridylase 1-like protein.	0.695
LOC103175060	yars1	ENSCMIP00000001276	ENSCMIP00000032726	Uncharacterized protein.	Tyrosine--tRNA ligase.	0.619
LOC103188158	ENSCMIP00000000515	ENSCMIP00000024118	ENSCMIP00000000515	Uncharacterized protein.	Uncharacterized protein.	0.713
LOC103188158	LOC103175060	ENSCMIP00000024118	ENSCMIP00000001276	Uncharacterized protein.	Uncharacterized protein.	0.500
LOC103188158	eprs1	ENSCMIP00000024118	ENSCMIP00000043653	Uncharacterized protein.	Uncharacterized protein.	0.455
LOC103188158	ergic3	ENSCMIP00000024118	ENSCMIP00000045028	Uncharacterized protein.	Uncharacterized protein.	0.500
LOC103188158	yars1	ENSCMIP00000024118	ENSCMIP00000032726	Uncharacterized protein.	Tyrosine--tRNA ligase.	0.586