STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ssbp1Single-stranded DNA-binding protein, mitochondrial. (148 aa)    
Predicted Functional Partners:
polrmt
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
     
 0.943
polg2
HGTP_anticodon domain-containing protein.
    
 0.943
polg
POLAc domain-containing protein.
   
 0.935
tfam
Uncharacterized protein.
   
 0.929
clpp
ATP-dependent Clp protease proteolytic subunit.
   
 0.915
meiob
Uncharacterized protein.
    
 
 0.903
LOC103172197
SF4 helicase domain-containing protein.
   
 
 0.889
msh6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 
 0.888
mrps6
Uncharacterized protein.
  
  
 0.879
mrpl35
Uncharacterized protein.
   
 
 0.865
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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