STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ap5m1MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (497 aa)    
Predicted Functional Partners:
Ap5s1
Uncharacterized protein.
    
 0.983
spg11
Spatacsin_C domain-containing protein.
    
 
 0.963
ap5z1
Uncharacterized protein.
    
 0.921
ap4b1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.799
gak
Uncharacterized protein.
   
 0.763
ap4e1
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 0.756
ap3d1
Adaptin_N domain-containing protein.
   
 0.745
LOC103191386
AP-1 complex subunit gamma.
   
 0.744
ap1g1
AP-1 complex subunit gamma.
   
 0.744
ap1b1
Uncharacterized protein.
   
 0.742
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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