STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nav1Uncharacterized protein. (1797 aa)    
Predicted Functional Partners:
mapre1
Uncharacterized protein.
    
   0.814
iqcc
Uncharacterized protein.
      
 0.813
iqce
Uncharacterized protein.
    
 0.707
cpn1
Uncharacterized protein.
     
 0.666
LOC103177778
G2/mitotic-specific cyclin-B1; Belongs to the cyclin family.
    
  0.647
LOC103177779
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
    
  0.647
ccnb2
G2/mitotic-specific cyclin-B2-like protein; Belongs to the cyclin family.
    
  0.647
Htr6
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.646
scn4a
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
      
 0.644
csrp1
Uncharacterized protein.
    
 
 0.547
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.