STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
far1Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. (519 aa)    
Predicted Functional Partners:
LOC103186227
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
  
 
0.901
gnpat
PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.
 
    
 0.856
cask
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
      
 0.623
agps
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
  
  
 0.605
gpr171
Putative G-protein coupled receptor 171-like protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.598
piezo1
Piezo-type mechanosensitive ion channel component.
      
 0.570
ano1
Anoctamin.
      
 0.570
Gpr82
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.567
nudcd1
CS domain-containing protein.
    
   0.552
ENSCMIP00000001257
Uncharacterized protein.
  
 
 0.527
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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