Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Cdc42ep2CRIB domain-containing protein. (213 aa)    
Predicted Functional Partners:
cdc42
Cell division control protein 42-like protein.
    
 0.968
rhoj
Uncharacterized protein.
    
 0.683
rhoq
Uncharacterized protein.
    
 0.683
rhoh
Rho-related GTP-binding protein RhoH-like protein.
    
 0.683
cdc42ep3
Cdc42 effector protein 3-like protein.
     
  0.664
ENSCMIP00000000657
Uncharacterized protein.
      
 0.648
cdc42ep4
CRIB domain-containing protein.
   
 
 0.641
frmd8
FERM domain-containing protein.
      
 0.591
septin10
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.566
arhgap26
Rho GTPase-activating protein 26-like protein.
    
   0.546
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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