phlda3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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experimentally determined

co-expression

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gene co-occurrence

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[Homology]

Score

phlda3

Pleckstrin homology-like domain family A member 1. (129 aa)

Predicted Functional Partners:

V9LG86_CALMI

0.663

lsp1

0.626

tnni1

0.533

LOC103185561

0.509

LOC103185560

0.417

ptpro

0.409

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103185560	LOC103185561	ENSCMIP00000028195	ENSCMIP00000028203	Uncharacterized protein.	Uncharacterized protein.	0.903
LOC103185560	phlda3	ENSCMIP00000028195	ENSCMIP00000001508	Uncharacterized protein.	Pleckstrin homology-like domain family A member 1.	0.417
LOC103185560	tnni1	ENSCMIP00000028195	ENSCMIP00000001519	Uncharacterized protein.	Troponin I, slow skeletal muscle-like protein.	0.903
LOC103185561	LOC103185560	ENSCMIP00000028203	ENSCMIP00000028195	Uncharacterized protein.	Uncharacterized protein.	0.903
LOC103185561	phlda3	ENSCMIP00000028203	ENSCMIP00000001508	Uncharacterized protein.	Pleckstrin homology-like domain family A member 1.	0.509
LOC103185561	tnni1	ENSCMIP00000028203	ENSCMIP00000001519	Uncharacterized protein.	Troponin I, slow skeletal muscle-like protein.	0.901
V9LG86_CALMI	phlda3	ENSCMIP00000036553	ENSCMIP00000001508	Calmodulin-like protein; Belongs to the calmodulin family.	Pleckstrin homology-like domain family A member 1.	0.663
V9LG86_CALMI	ptpro	ENSCMIP00000036553	ENSCMIP00000028146	Calmodulin-like protein; Belongs to the calmodulin family.	Uncharacterized protein.	0.509
lsp1	phlda3	ENSCMIP00000027472	ENSCMIP00000001508	Uncharacterized protein.	Pleckstrin homology-like domain family A member 1.	0.626
phlda3	LOC103185560	ENSCMIP00000001508	ENSCMIP00000028195	Pleckstrin homology-like domain family A member 1.	Uncharacterized protein.	0.417
phlda3	LOC103185561	ENSCMIP00000001508	ENSCMIP00000028203	Pleckstrin homology-like domain family A member 1.	Uncharacterized protein.	0.509
phlda3	V9LG86_CALMI	ENSCMIP00000001508	ENSCMIP00000036553	Pleckstrin homology-like domain family A member 1.	Calmodulin-like protein; Belongs to the calmodulin family.	0.663
phlda3	lsp1	ENSCMIP00000001508	ENSCMIP00000027472	Pleckstrin homology-like domain family A member 1.	Uncharacterized protein.	0.626
phlda3	ptpro	ENSCMIP00000001508	ENSCMIP00000028146	Pleckstrin homology-like domain family A member 1.	Uncharacterized protein.	0.409
phlda3	tnni1	ENSCMIP00000001508	ENSCMIP00000001519	Pleckstrin homology-like domain family A member 1.	Troponin I, slow skeletal muscle-like protein.	0.533
ptpro	V9LG86_CALMI	ENSCMIP00000028146	ENSCMIP00000036553	Uncharacterized protein.	Calmodulin-like protein; Belongs to the calmodulin family.	0.509
ptpro	phlda3	ENSCMIP00000028146	ENSCMIP00000001508	Uncharacterized protein.	Pleckstrin homology-like domain family A member 1.	0.409
tnni1	LOC103185560	ENSCMIP00000001519	ENSCMIP00000028195	Troponin I, slow skeletal muscle-like protein.	Uncharacterized protein.	0.903
tnni1	LOC103185561	ENSCMIP00000001519	ENSCMIP00000028203	Troponin I, slow skeletal muscle-like protein.	Uncharacterized protein.	0.901
tnni1	phlda3	ENSCMIP00000001519	ENSCMIP00000001508	Troponin I, slow skeletal muscle-like protein.	Pleckstrin homology-like domain family A member 1.	0.533