STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172449Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (219 aa)    
Predicted Functional Partners:
gabra6
Neur_chan_memb domain-containing protein.
 
  0.874
ENSCMIP00000007746
Neur_chan_LBD domain-containing protein.
 
     0.836
gabrb2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.757
gabrb1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.757
gabrb3
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.757
gabrg1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.743
gabrg2
Gamma-aminobutyric acid receptor subunit gamma-2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.743
Gabrg3
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.743
gabra2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.596
gabrr2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.591
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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