STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc23a1Uncharacterized protein. (639 aa)    
Predicted Functional Partners:
LOC103186212-2
Uncharacterized protein.
  
  
 
0.904
sil1
Uncharacterized protein.
      
 0.891
slc33a1
Uncharacterized protein.
   
  
 0.688
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.686
umps
OMPdecase domain-containing protein.
  
  
 0.611
aste1
XPG_I_2 domain-containing protein.
      
 0.600
LOC103185915
Uncharacterized protein.
      
 0.560
slc7a7
Uncharacterized protein.
      
 0.560
golt1a
Uncharacterized protein.
  
  
 0.555
golt1b
Uncharacterized protein.
  
  
 0.555
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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