vps4a protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

vps4a

Uncharacterized protein; Belongs to the AAA ATPase family. (475 aa)

Predicted Functional Partners:

ENSCMIP00000015460

0.996

chmp5

0.992

chmp1b

0.983

chmp1a

0.983

ist1

0.964

chmp2a

0.957

LOC103181485

0.952

chmp6

0.945

chmp2b

0.931

vps4b

0.901

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000015460	LOC103181485	ENSCMIP00000015460	ENSCMIP00000027175	Uncharacterized protein.	Charged multivesicular body protein 3-like protein.	0.879
ENSCMIP00000015460	chmp1a	ENSCMIP00000015460	ENSCMIP00000031826	Uncharacterized protein.	Uncharacterized protein.	0.987
ENSCMIP00000015460	chmp1b	ENSCMIP00000015460	ENSCMIP00000015833	Uncharacterized protein.	Uncharacterized protein.	0.987
ENSCMIP00000015460	chmp2a	ENSCMIP00000015460	ENSCMIP00000011904	Uncharacterized protein.	Charged multivesicular body protein 2a.	0.986
ENSCMIP00000015460	chmp2b	ENSCMIP00000015460	ENSCMIP00000047093	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSCMIP00000015460	chmp5	ENSCMIP00000015460	ENSCMIP00000042536	Uncharacterized protein.	Charged multivesicular body protein 5-like protein.	0.999
ENSCMIP00000015460	chmp6	ENSCMIP00000015460	ENSCMIP00000047974	Uncharacterized protein.	Uncharacterized protein.	0.799
ENSCMIP00000015460	ist1	ENSCMIP00000015460	ENSCMIP00000034569	Uncharacterized protein.	IST1-like protein.	0.974
ENSCMIP00000015460	vps4a	ENSCMIP00000015460	ENSCMIP00000001585	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.996
ENSCMIP00000015460	vps4b	ENSCMIP00000015460	ENSCMIP00000015157	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.996
LOC103181485	ENSCMIP00000015460	ENSCMIP00000027175	ENSCMIP00000015460	Charged multivesicular body protein 3-like protein.	Uncharacterized protein.	0.879
LOC103181485	chmp1a	ENSCMIP00000027175	ENSCMIP00000031826	Charged multivesicular body protein 3-like protein.	Uncharacterized protein.	0.930
LOC103181485	chmp1b	ENSCMIP00000027175	ENSCMIP00000015833	Charged multivesicular body protein 3-like protein.	Uncharacterized protein.	0.933
LOC103181485	chmp2a	ENSCMIP00000027175	ENSCMIP00000011904	Charged multivesicular body protein 3-like protein.	Charged multivesicular body protein 2a.	0.990
LOC103181485	chmp2b	ENSCMIP00000027175	ENSCMIP00000047093	Charged multivesicular body protein 3-like protein.	Uncharacterized protein.	0.976
LOC103181485	chmp5	ENSCMIP00000027175	ENSCMIP00000042536	Charged multivesicular body protein 3-like protein.	Charged multivesicular body protein 5-like protein.	0.986
LOC103181485	chmp6	ENSCMIP00000027175	ENSCMIP00000047974	Charged multivesicular body protein 3-like protein.	Uncharacterized protein.	0.997
LOC103181485	ist1	ENSCMIP00000027175	ENSCMIP00000034569	Charged multivesicular body protein 3-like protein.	IST1-like protein.	0.983
LOC103181485	vps4a	ENSCMIP00000027175	ENSCMIP00000001585	Charged multivesicular body protein 3-like protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.952
LOC103181485	vps4b	ENSCMIP00000027175	ENSCMIP00000015157	Charged multivesicular body protein 3-like protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.952