STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172452Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (303 aa)    
Predicted Functional Partners:
agxt
Serine--pyruvate aminotransferase.
  
 
 0.711
ENSCMIP00000034200
Gp_dh_N domain-containing protein.
  
 
 0.573
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.566
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.521
gcsh
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 
 0.517
dmgdh
Uncharacterized protein.
   
 
 0.462
idnk
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
  
 
 0.444
LOC103181391
Aldo_ket_red domain-containing protein.
  
 
 0.438
parp6
Poly [ADP-ribose] polymerase.
  
 0.436
pkm
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.436
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.