Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
igfn1Uncharacterized protein. (1191 aa)    
Predicted Functional Partners:
ENSCMIP00000032452
Ig-like domain-containing protein.
 
     
0.634
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.542
wdr18
WD_REPEATS_REGION domain-containing protein.
   
 0.537
tex10
Ipi1_N domain-containing protein.
   
 0.518
ivns1abp
Influenza virus NS1A-binding protein-like protein.
    
 
 0.495
mss51
MYND-type domain-containing protein.
   
 
 0.474
ENSCMIP00000032433
Uncharacterized protein.
 
      0.420
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.406
ENSCMIP00000032425
Uncharacterized protein.
 
     
0.406
ppp3r1
Uncharacterized protein.
    
 0.406
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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