STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts13Peptidase M12B domain-containing protein. (1317 aa)    
Predicted Functional Partners:
ENSCMIP00000001097
TIL domain-containing protein.
    
 0.741
ENSCMIP00000009625
Uncharacterized protein.
    
 0.741
ENSCMIP00000015000
Uncharacterized protein.
    
 0.741
otogl
Uncharacterized protein.
    
 0.741
otog
Uncharacterized protein.
    
 0.741
vwf
Uncharacterized protein.
    
 0.741
ENSCMIP00000034764
Uncharacterized protein.
    
 0.741
pofut2
Uncharacterized protein.
     
 0.721
LOC103179293
Uncharacterized protein.
     
 0.598
ENSCMIP00000005698
LRRCT domain-containing protein.
      
 0.595
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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