STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001651Uncharacterized protein. (57 aa)    
Predicted Functional Partners:
snw1
SKIP_SNW domain-containing protein.
   
 0.985
aqr
Uncharacterized protein.
   
 0.983
crnkl1
Uncharacterized protein.
   
 0.976
Ppie
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
 0.968
bud31
Uncharacterized protein.
    
 0.960
ENSCMIP00000003367
Uncharacterized protein.
   
 
 0.957
isy1
Uncharacterized protein.
    
 0.953
rbm22
Uncharacterized protein.
   
 0.948
syf2
Uncharacterized protein.
    
 
 0.948
cwc22
MI domain-containing protein.
   
 0.948
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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