STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103184705Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
LOC103183190
Uncharacterized protein.
    
 
 0.827
efcab1
Uncharacterized protein.
    
 
 0.827
ENSCMIP00000006760
Uncharacterized protein.
   
 
 0.792
tekt3
Uncharacterized protein.
   
   0.739
efhc2
Uncharacterized protein.
    
 
 0.725
ENSCMIP00000000125
Uncharacterized protein.
   
   0.721
LOC103179150
Uncharacterized protein.
   
   0.708
tekt2
Uncharacterized protein.
   
   0.707
armc4
Uncharacterized protein.
   
 
 0.705
Armc3
Uncharacterized protein.
   
 
 0.701
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.