Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001692Plexin_cytopl domain-containing protein. (105 aa)    
Predicted Functional Partners:
Plxnc1
Plexin_cytopl domain-containing protein.
 
  
  0.966
nrp1
Neuropilin; Belongs to the neuropilin family.
   
 0.769
met
Uncharacterized protein.
    
  0.707
ENSCMIP00000043212
Sema domain-containing protein.
    
  0.707
LOC103176643
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.673
ENSCMIP00000027617
Plexin_cytopl domain-containing protein.
  
  
  0.634
ENSCMIP00000002810
Sema domain-containing protein; Belongs to the semaphorin family.
  
 
 0.630
LOC103173110
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.622
LOC103176642
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.622
plxnb2
Sema domain-containing protein.
    
0.617
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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