Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103179113Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
tm2d2
TM2 domain-containing protein.
    
   0.864
fam83a
FAM83 domain-containing protein.
   
 0.770
LOC103190557
Uncharacterized protein.
   
 0.770
fam83c
FAM83 domain-containing protein.
   
 0.770
ENSCMIP00000004166
Uncharacterized protein.
    
 
 0.732
ndufaf1
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex, assembly factor 1.
   
  
 0.595
ndufaf2
Mitochondrial mimitin.
   
  
 0.565
mrpl41
Uncharacterized protein.
   
    0.548
LOC103179830
Uncharacterized protein C12orf73-like protein.
     
 0.538
naa38
Sm domain-containing protein.
   
    0.507
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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