ropn1l protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ropn1l

Ropporin-1-like protein. (216 aa)

Predicted Functional Partners:

Ak9

0.915

ENSCMIP00000035595

0.915

marchf6

0.720

catip

0.656

ttc29

0.644

nme5

0.629

ENSCMIP00000035598

0.622

Cabyr

0.590

cfap36

0.587

cfap44

0.585

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ak9	ENSCMIP00000035595	ENSCMIP00000035587	ENSCMIP00000035595	Uncharacterized protein.	Uncharacterized protein.	0.999
Ak9	ENSCMIP00000035598	ENSCMIP00000035587	ENSCMIP00000035598	Uncharacterized protein.	Uncharacterized protein.	0.993
Ak9	catip	ENSCMIP00000035587	ENSCMIP00000014492	Uncharacterized protein.	Uncharacterized protein.	0.604
Ak9	cfap44	ENSCMIP00000035587	ENSCMIP00000025952	Uncharacterized protein.	Uncharacterized protein.	0.945
Ak9	nme5	ENSCMIP00000035587	ENSCMIP00000013572	Uncharacterized protein.	Nucleoside diphosphate kinase-like 5-like protein; Belongs to the NDK family.	0.563
Ak9	ropn1l	ENSCMIP00000035587	ENSCMIP00000001742	Uncharacterized protein.	Ropporin-1-like protein.	0.915
Ak9	ttc29	ENSCMIP00000035587	ENSCMIP00000019191	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.442
Cabyr	catip	ENSCMIP00000007722	ENSCMIP00000014492	RIIa domain-containing protein.	Uncharacterized protein.	0.603
Cabyr	cfap44	ENSCMIP00000007722	ENSCMIP00000025952	RIIa domain-containing protein.	Uncharacterized protein.	0.556
Cabyr	ropn1l	ENSCMIP00000007722	ENSCMIP00000001742	RIIa domain-containing protein.	Ropporin-1-like protein.	0.590
ENSCMIP00000035595	Ak9	ENSCMIP00000035595	ENSCMIP00000035587	Uncharacterized protein.	Uncharacterized protein.	0.999
ENSCMIP00000035595	ENSCMIP00000035598	ENSCMIP00000035595	ENSCMIP00000035598	Uncharacterized protein.	Uncharacterized protein.	0.995
ENSCMIP00000035595	cfap44	ENSCMIP00000035595	ENSCMIP00000025952	Uncharacterized protein.	Uncharacterized protein.	0.945
ENSCMIP00000035595	nme5	ENSCMIP00000035595	ENSCMIP00000013572	Uncharacterized protein.	Nucleoside diphosphate kinase-like 5-like protein; Belongs to the NDK family.	0.563
ENSCMIP00000035595	ropn1l	ENSCMIP00000035595	ENSCMIP00000001742	Uncharacterized protein.	Ropporin-1-like protein.	0.915
ENSCMIP00000035595	ttc29	ENSCMIP00000035595	ENSCMIP00000019191	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.442
ENSCMIP00000035598	Ak9	ENSCMIP00000035598	ENSCMIP00000035587	Uncharacterized protein.	Uncharacterized protein.	0.993
ENSCMIP00000035598	ENSCMIP00000035595	ENSCMIP00000035598	ENSCMIP00000035595	Uncharacterized protein.	Uncharacterized protein.	0.995
ENSCMIP00000035598	cfap44	ENSCMIP00000035598	ENSCMIP00000025952	Uncharacterized protein.	Uncharacterized protein.	0.843
ENSCMIP00000035598	nme5	ENSCMIP00000035598	ENSCMIP00000013572	Uncharacterized protein.	Nucleoside diphosphate kinase-like 5-like protein; Belongs to the NDK family.	0.508