STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chrna5Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
chrna1
Uncharacterized protein.
  
0.837
LOC103172408
Uncharacterized protein.
  
0.825
chrnd
Uncharacterized protein.
   
0.751
LOC103189465
Uncharacterized protein.
  
0.730
LOC103188367
Uncharacterized protein.
  
0.729
LOC103177707
Uncharacterized protein.
  
0.728
LOC103177744
Uncharacterized protein.
  
0.727
LOC103189967
Uncharacterized protein.
  
0.712
LOC103177743
Uncharacterized protein.
  
0.711
chrna7
Uncharacterized protein.
  
0.709
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.