STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001827Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
tcaim
Uncharacterized protein.
      
 0.629
smim12
Uncharacterized protein.
    
 
 0.612
lrrc40
Uncharacterized protein.
      
 0.610
snapc3
snRNA-activating protein complex subunit 3.
      
 0.602
timm21
Uncharacterized protein.
   
  
 0.591
LOC103176055
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.591
shisa4
Uncharacterized protein.
      
 0.589
LOC103174353
Protein kinase domain-containing protein.
    
  0.571
ENSCMIP00000005651
Uncharacterized protein.
    
  0.571
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.571
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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