STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001851Uncharacterized protein. (59 aa)    
Predicted Functional Partners:
exoc5
Exocyst complex component 5.
   
 0.698
exoc4
Sec8_exocyst domain-containing protein.
    
 0.692
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.687
rilpl2
Uncharacterized protein.
   
 
 0.684
rab3il1
Sec2p domain-containing protein.
    
 0.622
rab3ip
Rab-3A-interacting protein-like protein.
    
 0.622
exoc3l1
Uncharacterized protein.
    
 0.615
exoc3
Uncharacterized protein.
    
 0.615
cep290
CEP209_CC5 domain-containing protein.
    
 0.611
rab1a
Uncharacterized protein.
   
 0.609
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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