Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000001884Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
ube2h
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.781
uba3
Ubiquitin-activating enzyme 3.
    
 0.754
ube2j2
Ubiquitin-conjugating enzyme E2, J2.
     
 0.751
c1qtnf12
C1q domain-containing protein.
     
 0.751
ube2k
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.750
uba5
ThiF domain-containing protein.
    
 0.742
LOC103173873
UBA_e1_C domain-containing protein.
   
 0.734
uba6
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.734
uba7
UBA_e1_C domain-containing protein.
   
 0.734
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.728
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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