STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd46ANK_REP_REGION domain-containing protein. (228 aa)    
Predicted Functional Partners:
ubxn7
UBX domain-containing protein 7.
    
 0.958
cul2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.805
cars2
tRNA-synt_1e domain-containing protein.
    
 
 0.725
Htr2c
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.716
eloc
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.680
Col4a4
Collagen IV NC1 domain-containing protein.
    
 0.675
elob
Ubiquitin-like domain-containing protein.
    
 0.610
g2e3
PHD-type domain-containing protein.
    
 0.588
rbx1
RING-type domain-containing protein.
    
 0.558
rnf7
RING-box protein 2-like protein.
    
 0.558
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.