STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103174269Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
ENSCMIP00000004681
tRNA_SAD domain-containing protein.
  
  
  0.936
aars1
AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 
 0.920
aars2
AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 
 0.920
ears2
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.594
eprs1
Uncharacterized protein.
     
 0.562
iars1
Isoleucyl-tRNA synthetase, cytoplasmic-like protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.561
asnsd1
Glutamine amidotransferase type-2 domain-containing protein.
      
 0.547
iars2
Isoleucine-tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.475
yars1
Tyrosine--tRNA ligase.
      
 0.473
sars1
Seryl-tRNA synthetase, cytoplasmic-like protein.
      
 0.424
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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