otud5 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

otud5

Uncharacterized protein. (187 aa)

Predicted Functional Partners:

rps27a

0.944

traf3

0.938

uba52

0.866

Ubc

0.866

otulinl

0.603

atg3

0.582

usp3

0.577

usp2

0.568

Uchl5

0.563

usp47

0.547

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ubc	Uchl5	ENSCMIP00000028897	ENSCMIP00000046117	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.855
Ubc	otud5	ENSCMIP00000028897	ENSCMIP00000002008	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.866
Ubc	otulinl	ENSCMIP00000028897	ENSCMIP00000027823	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.575
Ubc	rps27a	ENSCMIP00000028897	ENSCMIP00000006356	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.994
Ubc	traf3	ENSCMIP00000028897	ENSCMIP00000034589	Ubiquitin-like domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.650
Ubc	uba52	ENSCMIP00000028897	ENSCMIP00000012025	Ubiquitin-like domain-containing protein.	Ribosomal protein L40-like isoform 1.	0.999
Ubc	usp2	ENSCMIP00000028897	ENSCMIP00000002884	Ubiquitin-like domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.871
Ubc	usp3	ENSCMIP00000028897	ENSCMIP00000013953	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.677
Ubc	usp47	ENSCMIP00000028897	ENSCMIP00000004811	Ubiquitin-like domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.429
Uchl5	Ubc	ENSCMIP00000046117	ENSCMIP00000028897	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.855
Uchl5	otud5	ENSCMIP00000046117	ENSCMIP00000002008	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.563
Uchl5	rps27a	ENSCMIP00000046117	ENSCMIP00000006356	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.847
Uchl5	uba52	ENSCMIP00000046117	ENSCMIP00000012025	Ubiquitin carboxyl-terminal hydrolase.	Ribosomal protein L40-like isoform 1.	0.804
atg3	otud5	ENSCMIP00000027669	ENSCMIP00000002008	Autophagy-related protein 3.	Uncharacterized protein.	0.582
otud5	Ubc	ENSCMIP00000002008	ENSCMIP00000028897	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.866
otud5	Uchl5	ENSCMIP00000002008	ENSCMIP00000046117	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.563
otud5	atg3	ENSCMIP00000002008	ENSCMIP00000027669	Uncharacterized protein.	Autophagy-related protein 3.	0.582
otud5	otulinl	ENSCMIP00000002008	ENSCMIP00000027823	Uncharacterized protein.	Uncharacterized protein.	0.603
otud5	rps27a	ENSCMIP00000002008	ENSCMIP00000006356	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.944
otud5	traf3	ENSCMIP00000002008	ENSCMIP00000034589	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.938