STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103174274Nuclear receptor domain-containing protein. (220 aa)    
Predicted Functional Partners:
ncor1
Uncharacterized protein.
    
 0.785
ENSCMIP00000033330
Uncharacterized protein.
    
 0.785
Ncor2
Uncharacterized protein.
    
 0.785
LOC103174756
Uncharacterized protein.
    
 0.761
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.580
nr1d2
Uncharacterized protein.
  
0.486
per2
PAS domain-containing protein.
   
 
 0.478
arntl
Uncharacterized protein.
     
 0.468
s1pr4
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.451
LOC103173104
Neur_chan_LBD domain-containing protein.
  
     0.441
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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