lgalsl protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

lgalsl

Galectin. (188 aa)

Predicted Functional Partners:

tbc1d31

0.673

lyrm9

0.623

itgb1bp1

0.619

st3gal6

0.588

castor1

0.557

castor2

0.557

Flrt2

0.498

mrs2

0.483

ENSCMIP00000018645

0.483

LOC103191020

0.477

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000018645	lgalsl	ENSCMIP00000018645	ENSCMIP00000002091	Uncharacterized protein.	Galectin.	0.483
ENSCMIP00000018645	mrs2	ENSCMIP00000018645	ENSCMIP00000018642	Uncharacterized protein.	Magnesium transporter.	0.426
Flrt2	castor1	ENSCMIP00000033931	ENSCMIP00000015243	Uncharacterized protein.	Uncharacterized protein.	0.499
Flrt2	castor2	ENSCMIP00000033931	ENSCMIP00000041711	Uncharacterized protein.	Uncharacterized protein.	0.499
Flrt2	lgalsl	ENSCMIP00000033931	ENSCMIP00000002091	Uncharacterized protein.	Galectin.	0.498
LOC103191020	lgalsl	ENSCMIP00000019780	ENSCMIP00000002091	Galectin.	Galectin.	0.477
castor1	Flrt2	ENSCMIP00000015243	ENSCMIP00000033931	Uncharacterized protein.	Uncharacterized protein.	0.499
castor1	castor2	ENSCMIP00000015243	ENSCMIP00000041711	Uncharacterized protein.	Uncharacterized protein.	0.901
castor1	lgalsl	ENSCMIP00000015243	ENSCMIP00000002091	Uncharacterized protein.	Galectin.	0.557
castor2	Flrt2	ENSCMIP00000041711	ENSCMIP00000033931	Uncharacterized protein.	Uncharacterized protein.	0.499
castor2	castor1	ENSCMIP00000041711	ENSCMIP00000015243	Uncharacterized protein.	Uncharacterized protein.	0.901
castor2	lgalsl	ENSCMIP00000041711	ENSCMIP00000002091	Uncharacterized protein.	Galectin.	0.557
itgb1bp1	lgalsl	ENSCMIP00000019338	ENSCMIP00000002091	Integrin beta-1-binding protein 1.	Galectin.	0.619
lgalsl	ENSCMIP00000018645	ENSCMIP00000002091	ENSCMIP00000018645	Galectin.	Uncharacterized protein.	0.483
lgalsl	Flrt2	ENSCMIP00000002091	ENSCMIP00000033931	Galectin.	Uncharacterized protein.	0.498
lgalsl	LOC103191020	ENSCMIP00000002091	ENSCMIP00000019780	Galectin.	Galectin.	0.477
lgalsl	castor1	ENSCMIP00000002091	ENSCMIP00000015243	Galectin.	Uncharacterized protein.	0.557
lgalsl	castor2	ENSCMIP00000002091	ENSCMIP00000041711	Galectin.	Uncharacterized protein.	0.557
lgalsl	itgb1bp1	ENSCMIP00000002091	ENSCMIP00000019338	Galectin.	Integrin beta-1-binding protein 1.	0.619
lgalsl	lyrm9	ENSCMIP00000002091	ENSCMIP00000024865	Galectin.	Uncharacterized protein; Belongs to the complex I LYR family.	0.623