STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
waplWAPL domain-containing protein. (1180 aa)    
Predicted Functional Partners:
trip12
Putative E3 ubiquitin-protein ligase TRIP12.
   
    0.962
smc3
Structural maintenance of chromosomes protein.
   
 0.962
pds5a
Uncharacterized protein.
   
 0.956
pds5b
Uncharacterized protein.
   
 0.956
rad21
Uncharacterized protein.
    
 0.943
LOC103171617
Uncharacterized protein.
    
 0.899
ENSCMIP00000016420
Uncharacterized protein.
    
 0.893
mau2
TPR_REGION domain-containing protein.
     
 0.875
LOC103190678
Peptidase C50 domain-containing protein.
     
 0.857
smc4
Structural maintenance of chromosomes protein.
   
 0.799
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.