Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbxo43Uncharacterized protein. (658 aa)    
Predicted Functional Partners:
cdc20
Cell division cycle 20-like protein.
   
 0.976
cdc20b
WD_REPEATS_REGION domain-containing protein.
   
 0.976
plk1
Serine/threonine-protein kinase PLK.
   
 0.959
LOC103182116
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.948
skp1
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.938
cul1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.935
fbxw11
Uncharacterized protein.
     
 0.921
LOC103177778
G2/mitotic-specific cyclin-B1; Belongs to the cyclin family.
   
 
 0.918
LOC103177779
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 
 0.918
cdk1
Cyclin-dependent kinase 1-like protein; Belongs to the protein kinase superfamily.
   
 0.912
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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