STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl3Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (205 aa)    
Predicted Functional Partners:
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 0.937
unc119
GMP_PDE_delta domain-containing protein.
    
 0.934
itsn2
Uncharacterized protein.
    
 0.847
cfap36
ARL2_Bind_BART domain-containing protein.
   
 
 0.825
tbcc
C-CAP/cofactor C-like domain-containing protein.
    
 0.822
pde6d
GMP_PDE_delta domain-containing protein.
   
 0.820
cabp1
Uncharacterized protein.
   
 0.780
itsn1
Uncharacterized protein.
    
 0.764
unc119b
GMP_PDE_delta domain-containing protein.
    
 0.745
nphp3
TPR_REGION domain-containing protein.
    
 0.631
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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