mgat4c protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mgat4c

Uncharacterized protein. (468 aa)

Predicted Functional Partners:

mgat5

0.945

ccdc126

0.925

ENSCMIP00000002064

0.902

LOC103179072

0.901

susd4

0.431

LOC103190632

0.424

chordc1

0.410

polr3b

0.406

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000002064	LOC103179072	ENSCMIP00000002064	ENSCMIP00000042255	Uncharacterized protein.	Uncharacterized protein.	0.902
ENSCMIP00000002064	ccdc126	ENSCMIP00000002064	ENSCMIP00000040115	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSCMIP00000002064	mgat4c	ENSCMIP00000002064	ENSCMIP00000002294	Uncharacterized protein.	Uncharacterized protein.	0.902
ENSCMIP00000002064	mgat5	ENSCMIP00000002064	ENSCMIP00000017292	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like protein.	0.900
LOC103179072	ENSCMIP00000002064	ENSCMIP00000042255	ENSCMIP00000002064	Uncharacterized protein.	Uncharacterized protein.	0.902
LOC103179072	ccdc126	ENSCMIP00000042255	ENSCMIP00000040115	Uncharacterized protein.	Uncharacterized protein.	0.925
LOC103179072	mgat4c	ENSCMIP00000042255	ENSCMIP00000002294	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC103179072	mgat5	ENSCMIP00000042255	ENSCMIP00000017292	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like protein.	0.925
LOC103190632	mgat4c	ENSCMIP00000039763	ENSCMIP00000002294	UPF0444 transmembrane protein C12orf23-like protein.	Uncharacterized protein.	0.424
LOC103190632	polr3b	ENSCMIP00000039763	ENSCMIP00000032437	UPF0444 transmembrane protein C12orf23-like protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.553
ccdc126	ENSCMIP00000002064	ENSCMIP00000040115	ENSCMIP00000002064	Uncharacterized protein.	Uncharacterized protein.	0.900
ccdc126	LOC103179072	ENSCMIP00000040115	ENSCMIP00000042255	Uncharacterized protein.	Uncharacterized protein.	0.925
ccdc126	mgat4c	ENSCMIP00000040115	ENSCMIP00000002294	Uncharacterized protein.	Uncharacterized protein.	0.925
ccdc126	mgat5	ENSCMIP00000040115	ENSCMIP00000017292	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like protein.	0.901
chordc1	mgat4c	ENSCMIP00000031731	ENSCMIP00000002294	Uncharacterized protein.	Uncharacterized protein.	0.410
mgat4c	ENSCMIP00000002064	ENSCMIP00000002294	ENSCMIP00000002064	Uncharacterized protein.	Uncharacterized protein.	0.902
mgat4c	LOC103179072	ENSCMIP00000002294	ENSCMIP00000042255	Uncharacterized protein.	Uncharacterized protein.	0.901
mgat4c	LOC103190632	ENSCMIP00000002294	ENSCMIP00000039763	Uncharacterized protein.	UPF0444 transmembrane protein C12orf23-like protein.	0.424
mgat4c	ccdc126	ENSCMIP00000002294	ENSCMIP00000040115	Uncharacterized protein.	Uncharacterized protein.	0.925
mgat4c	chordc1	ENSCMIP00000002294	ENSCMIP00000031731	Uncharacterized protein.	Uncharacterized protein.	0.410