zfand1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

zfand1

Uncharacterized protein. (277 aa)

Predicted Functional Partners:

psmd1

0.714

vcp

0.669

spata5

0.664

spata5l1

0.664

nsfl1c

0.663

ubxn2b

0.663

nploc4

0.660

faap100

0.660

psmd6

0.643

impa1

0.636

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
faap100	nsfl1c	ENSCMIP00000044638	ENSCMIP00000023884	Uncharacterized protein.	Uncharacterized protein.	0.734
faap100	psmd1	ENSCMIP00000044638	ENSCMIP00000021085	Uncharacterized protein.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.476
faap100	psmd6	ENSCMIP00000044638	ENSCMIP00000012904	Uncharacterized protein.	PCI domain-containing protein.	0.505
faap100	spata5	ENSCMIP00000044638	ENSCMIP00000020568	Uncharacterized protein.	Uncharacterized protein.	0.835
faap100	spata5l1	ENSCMIP00000044638	ENSCMIP00000045847	Uncharacterized protein.	Uncharacterized protein.	0.835
faap100	ubxn2b	ENSCMIP00000044638	ENSCMIP00000043709	Uncharacterized protein.	Uncharacterized protein.	0.734
faap100	vcp	ENSCMIP00000044638	ENSCMIP00000020360	Uncharacterized protein.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.960
faap100	zfand1	ENSCMIP00000044638	ENSCMIP00000002297	Uncharacterized protein.	Uncharacterized protein.	0.660
impa1	zfand1	ENSCMIP00000002330	ENSCMIP00000002297	Inositol-1-monophosphatase.	Uncharacterized protein.	0.636
nploc4	nsfl1c	ENSCMIP00000044615	ENSCMIP00000023884	MPN domain-containing protein.	Uncharacterized protein.	0.734
nploc4	psmd1	ENSCMIP00000044615	ENSCMIP00000021085	MPN domain-containing protein.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.476
nploc4	psmd6	ENSCMIP00000044615	ENSCMIP00000012904	MPN domain-containing protein.	PCI domain-containing protein.	0.505
nploc4	spata5	ENSCMIP00000044615	ENSCMIP00000020568	MPN domain-containing protein.	Uncharacterized protein.	0.835
nploc4	spata5l1	ENSCMIP00000044615	ENSCMIP00000045847	MPN domain-containing protein.	Uncharacterized protein.	0.835
nploc4	ubxn2b	ENSCMIP00000044615	ENSCMIP00000043709	MPN domain-containing protein.	Uncharacterized protein.	0.734
nploc4	vcp	ENSCMIP00000044615	ENSCMIP00000020360	MPN domain-containing protein.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.995
nploc4	zfand1	ENSCMIP00000044615	ENSCMIP00000002297	MPN domain-containing protein.	Uncharacterized protein.	0.660
nsfl1c	faap100	ENSCMIP00000023884	ENSCMIP00000044638	Uncharacterized protein.	Uncharacterized protein.	0.734
nsfl1c	nploc4	ENSCMIP00000023884	ENSCMIP00000044615	Uncharacterized protein.	MPN domain-containing protein.	0.734
nsfl1c	spata5	ENSCMIP00000023884	ENSCMIP00000020568	Uncharacterized protein.	Uncharacterized protein.	0.849