Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000002327Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
timmdc1
Transmembrane protein.
   
   0.647
ndufs1
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 
 0.571
ndufb9
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 9-like protein; Belongs to the complex I LYR family.
   
 
 0.544
mysm1
Uncharacterized protein.
   
  
 0.516
ndufb8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.504
ndufs3
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 
 0.490
ndufb5
Uncharacterized protein.
   
   0.469
mrps33
28S ribosomal protein S33, mitochondrial-like protein.
      
 0.467
kbtbd4
Kelch repeat and BTB domain-containing protein 4-like protein.
    
 
 0.459
gtf2h5
General transcription factor IIH subunit 5.
   
  
 0.451
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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