STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txnipArrestin_C domain-containing protein. (284 aa)    
Predicted Functional Partners:
LOC103177722
Thioredoxin; Belongs to the thioredoxin family.
    
 0.960
ENSCMIP00000008461
Thioredoxin domain-containing protein.
    
 0.933
itch
E3 ubiquitin-protein ligase.
    
 
 0.908
txn2
Thioredoxin domain-containing protein.
    
 0.730
ddit4
Uncharacterized protein.
    
 
 0.670
LOC103172017
NACHT domain-containing protein.
    
 0.633
LOC103172555
NACHT domain-containing protein.
    
 0.633
LOC103190930
NACHT domain-containing protein.
    
 0.633
LOC103191259
NACHT domain-containing protein.
    
 0.633
ENSCMIP00000022992
Uncharacterized protein.
      
 0.553
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.