Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mrps28Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
mrps22
Uncharacterized protein.
   
  0.999
mrps16
Uncharacterized protein.
   
  0.998
mrps23
MRP-S23 domain-containing protein.
   
 0.998
mrps26
Uncharacterized protein.
   
 0.998
mrps7
Ribosomal_S7 domain-containing protein.
   
 0.997
dap3
Uncharacterized protein.
   
  0.997
mrps11
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
  0.997
mrps17
Uncharacterized protein.
   
  0.997
mrps6
Uncharacterized protein.
   
  0.997
mrps9
Uncharacterized protein.
   
  0.997
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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