STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stmn2Stathmin; Belongs to the stathmin family. (180 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.483
gak
Uncharacterized protein.
    
 0.479
Slc32a1
Aa_trans domain-containing protein.
   
  
 0.479
ttl
Uncharacterized protein.
    
 
 0.435
vps26c
Down syndrome critical region protein 3.
    
 0.424
ENSCMIP00000003261
Uncharacterized protein.
   
  0.419
rnd3
Rho-related GTP-binding protein RhoE-like protein.
   
  0.419
wdr90
Uncharacterized protein.
    
 0.404
dnm3
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.403
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.