LOC103171926 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene fusions

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[Homology]

Score

LOC103171926

Uncharacterized protein. (249 aa)

Predicted Functional Partners:

set

0.806

LOC103187764

0.607

iscu

0.600

ENSCMIP00000002932

0.578

dmap1

0.569

xpo1

0.556

LOC103186814

0.556

ENSCMIP00000038913

0.539

elavl1

0.473

ENSCMIP00000000678

0.445

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000000678	ENSCMIP00000002932	ENSCMIP00000000678	ENSCMIP00000002932	Uncharacterized protein.	Uncharacterized protein.	0.681
ENSCMIP00000000678	LOC103171926	ENSCMIP00000000678	ENSCMIP00000002585	Uncharacterized protein.	Uncharacterized protein.	0.445
ENSCMIP00000000678	LOC103187764	ENSCMIP00000000678	ENSCMIP00000021430	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.604
ENSCMIP00000000678	dmap1	ENSCMIP00000000678	ENSCMIP00000022986	Uncharacterized protein.	Uncharacterized protein.	0.798
ENSCMIP00000002932	ENSCMIP00000000678	ENSCMIP00000002932	ENSCMIP00000000678	Uncharacterized protein.	Uncharacterized protein.	0.681
ENSCMIP00000002932	LOC103171926	ENSCMIP00000002932	ENSCMIP00000002585	Uncharacterized protein.	Uncharacterized protein.	0.578
ENSCMIP00000002932	LOC103187764	ENSCMIP00000002932	ENSCMIP00000021430	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.953
ENSCMIP00000002932	dmap1	ENSCMIP00000002932	ENSCMIP00000022986	Uncharacterized protein.	Uncharacterized protein.	0.992
ENSCMIP00000038913	LOC103171926	ENSCMIP00000038913	ENSCMIP00000002585	Nup214_FG domain-containing protein.	Uncharacterized protein.	0.539
ENSCMIP00000038913	LOC103186814	ENSCMIP00000038913	ENSCMIP00000040302	Nup214_FG domain-containing protein.	Importin N-terminal domain-containing protein.	0.978
ENSCMIP00000038913	elavl1	ENSCMIP00000038913	ENSCMIP00000047351	Nup214_FG domain-containing protein.	ELAV-like protein; Belongs to the RRM elav family.	0.512
ENSCMIP00000038913	set	ENSCMIP00000038913	ENSCMIP00000037073	Nup214_FG domain-containing protein.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.861
ENSCMIP00000038913	xpo1	ENSCMIP00000038913	ENSCMIP00000030135	Nup214_FG domain-containing protein.	Exportin-1.	0.978
LOC103171926	ENSCMIP00000000678	ENSCMIP00000002585	ENSCMIP00000000678	Uncharacterized protein.	Uncharacterized protein.	0.445
LOC103171926	ENSCMIP00000002932	ENSCMIP00000002585	ENSCMIP00000002932	Uncharacterized protein.	Uncharacterized protein.	0.578
LOC103171926	ENSCMIP00000038913	ENSCMIP00000002585	ENSCMIP00000038913	Uncharacterized protein.	Nup214_FG domain-containing protein.	0.539
LOC103171926	LOC103186814	ENSCMIP00000002585	ENSCMIP00000040302	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.556
LOC103171926	LOC103187764	ENSCMIP00000002585	ENSCMIP00000021430	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.607
LOC103171926	dmap1	ENSCMIP00000002585	ENSCMIP00000022986	Uncharacterized protein.	Uncharacterized protein.	0.569
LOC103171926	elavl1	ENSCMIP00000002585	ENSCMIP00000047351	Uncharacterized protein.	ELAV-like protein; Belongs to the RRM elav family.	0.473