STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103171928KAP NTPase domain-containing protein. (711 aa)    
Predicted Functional Partners:
LOC103183058
Uncharacterized protein.
   
 
 0.674
xpr1
Uncharacterized protein.
   
 
 0.674
Crk
Uncharacterized protein.
    
 0.612
ENSCMIP00000030897
SH3 domain-containing protein.
    
 0.612
crkl
Crk-like protein.
    
 0.612
snx27
Uncharacterized protein.
    
 
 0.611
Rnd2
Uncharacterized protein.
    
  0.551
ENSCMIP00000003261
Uncharacterized protein.
    
 0.522
rnd3
Rho-related GTP-binding protein RhoE-like protein.
    
 0.522
ntrk3
Tyrosine-protein kinase receptor.
    
 0.515
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (22%) [HD]